How Engineered Peptides Could Drug the 'Undruggable' — Targeting Protein Interactions Inside Cells

Peptide engineering techniques like stapling, macrocyclization, and scaffold grafting are opening the door to targeting intracellular protein-protein interactions — a vast 'undruggable' space that small molecules and antibodies can't reach.

RPEP-028152015RETHINKTHC RESEARCH DATABASErethinkthc.com/research

Quick Facts

Study Type
Not classified
Evidence
Not graded
Sample
Not reported

What This Study Found

The review highlights recent technological and chemical advancements in peptide design that enable targeting of intracellular protein-protein interactions, a class of targets traditionally considered undruggable by small molecules or biologics.

Key Numbers

How They Did This

This is a review article summarizing current research and technological progress in peptide therapeutics, focusing on chemical strategies such as stapling and macrocyclization to stabilize peptides for intracellular targeting.

Why This Research Matters

This work is important because it outlines how peptides can overcome limitations of existing drugs, potentially leading to new treatments for diseases involving intracellular protein interactions.

The Bigger Picture

The 'undruggable' proteome represents roughly 80% of disease-relevant targets. Protein-protein interactions control cancer pathways (p53-MDM2), apoptosis (Bcl-2 family), and transcription factors that drive disease. Since 2015, several of the approaches described in this review have advanced to clinical trials — stapled peptides targeting MDM2 and Bcl-2 have shown promise. The concept of 'beyond rule-of-five' drug design, where molecules exceed traditional small-molecule size limits, has become a major pharmaceutical research theme.

What This Study Doesn't Tell Us

As a review, it does not present new experimental data and the evidence strength and clinical applicability of discussed approaches remain to be fully established.

Questions This Raises

  • ?Which peptide stabilization technique is most likely to produce the first FDA-approved intracellular PPI inhibitor?
  • ?Can cell-penetrating peptide strategies be combined with stapling to achieve both membrane crossing and target binding?
  • ?How do the manufacturing costs of engineered peptides compare to small molecules and antibodies?

Trust & Context

Key Stat:
~80% of targets are 'undruggable' Most intracellular protein-protein interactions can't be reached by traditional small molecules or antibodies — engineered peptides are positioned to fill this gap
Evidence Grade:
This is a review article in a medicinal chemistry journal, synthesizing research on peptide engineering strategies. It describes technological approaches rather than clinical evidence. The individual techniques reviewed have varying levels of preclinical and early clinical validation.
Study Age:
Published in 2015, this review captured the field at an inflection point. Since then, several stapled peptide and macrocyclic peptide drug candidates have entered clinical trials, partially validating the approaches described here.
Original Title:
Peptide therapeutics: targeting the undruggable space.
Published In:
European journal of medicinal chemistry, 94, 459-70 (2015)
Database ID:
RPEP-02815

Evidence Hierarchy

Meta-Analysis / Systematic Review
Randomized Controlled Trial
Cohort / Case-Control
Cross-Sectional / ObservationalSnapshot without intervening
This study
Case Report / Animal Study
What do these levels mean? →

Frequently Asked Questions

What makes a target 'undruggable'?

A target is considered 'undruggable' when existing drug types can't effectively reach or block it. Many critical disease targets are protein-protein interactions inside cells — their binding surfaces are too large and flat for small molecules, while antibodies are too big to enter cells. Peptides are being engineered to fill this gap because they can cover large surfaces and potentially be designed to cross cell membranes.

What is peptide stapling?

Stapling is a chemical technique that locks a peptide into its active 3D shape (usually an alpha-helix) by adding a chemical 'staple' across two points of the peptide backbone. This makes the peptide more resistant to degradation, better at binding its target, and in some cases able to cross cell membranes. It's one of the most promising approaches for creating peptide drugs that work inside cells.

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Cite This Study

RPEP-02815·https://rethinkpeptides.com/research/RPEP-02815

APA

Tsomaia, Natia. (2015). Peptide therapeutics: targeting the undruggable space.. European journal of medicinal chemistry, 94, 459-70. https://doi.org/10.1016/j.ejmech.2015.01.014

MLA

Tsomaia, Natia. "Peptide therapeutics: targeting the undruggable space.." European journal of medicinal chemistry, 2015. https://doi.org/10.1016/j.ejmech.2015.01.014

RethinkPeptides

RethinkPeptides Research Database. "Peptide therapeutics: targeting the undruggable space." RPEP-02815. Retrieved from https://rethinkpeptides.com/research/tsomaia-2015-peptide-therapeutics-targeting-the

Access the Original Study

Study data sourced from PubMed, a service of the U.S. National Library of Medicine, National Institutes of Health.

This study breakdown was produced by the RethinkPeptides research team. We analyze and report published research findings without making health recommendations. All interpretations are based solely on the published abstract and study data.